miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|21163291|gb|BJ484846.1|BJ484846 AAAATGTCAAAATGGTGAAAAGGGGGAAAGCAAATGATGTACTCCCTTCATTCCAAATTAAGTGACCCAAATTTAGAACT
AAGTTAGTACAAATATAGTACTAAAGCAACGGCACTTATTTTGGGACGGAGGGAATATAAACCGAACCAATGTGTTGCCT
GTAGCTGATATACATACTAGAGCTAGGTAGCTCAACATAAGGTGTACTCGCAATCAAGCAAACGAGTGAGGATCTCCTGG
CAGCTTGGGCGCTTNTCCGGTTCTGTCCAGCAATCTGCTATCAAGCTACCCAGAGGTCCATCTGGTATTTCCAATCTTGC
CCCTTCGTTCGCAACAGAGTAAACAACCTGAACTGGCGGCTTTCCTGCCCAGGGCCTACTCAGAGTGCAAAGCTCCCACA
TGATAACTCCTAGGCTGAAGATATCACACTTTTCTGTAAATGGTTCGTTACGAATAAGCTCAGGAGCCATCCACTCTGGA
GTGCCTGCAGATGAGTTGTCACTCATTGCAGAATTCGACAATAACCGAGAGAGCCCAAAATCACATAACTTGACTGT




Most similar to sp|Q05609|CTR1_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q05609|CTR1_ARATH Serine/threonine-protein kinase CTR1
            OS=Arabidopsis thaliana GN=CTR1 PE=1 SV=1
          Length = 821

 Score =  124 bits (312), Expect = 3e-28
 Identities = 62/117 (52%), Positives = 82/117 (70%), Gaps = 4/117 (3%)
 Frame = -1

Query: 557  TVKLCDFGLSRLLSNSAMSDNSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLS 378
            TVK+CDFGLSRL +++ +S  S+AGTPEWMAPE++R+EP  EK D++S GVI+WEL TL 
Sbjct: 689  TVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQ 748

Query: 377  RPWAGKPPVQVVYSVANEGARLEIP---DGPLGSLIADCWT-EPXKRPSCQEILTRL 219
            +PW    P QVV +V  +  RLEIP   +  + ++I  CWT EP KRPS   I+  L
Sbjct: 749  QPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLL 805